If you use FastQFile please e-mail mktrost@umich.edu or fill out the registration form.

Source Distribution

This version is recommended for Unix users with access to the GNU C++ compiler.

To install FastQFile, unpack the archive below and type make.

Instructions for the use of command line fastQValidator can be found at: FastQ Command-Line Documentation

Current Version: fastQFile_0.0.3.tgz

Version Updates:

• Update color space validation to require a 1 character primer base.
• Updated the return values to reflect more detailed error codes by adding more FastQStatus enums.
  • If a file close fails when the file status was INVALID, the CLOSE failure is returned since the invalid could be due to a corrupt file, which is better reflected by a CLOSE failure than invalid.
• Update the Validator to print the return value and the enum's string representation.

Previous Versions

fastQFile_0.0.2.tgz
• Added an option for disabling of all messages.
• Made the printing of Base Composition an option that is defaulted to not print.
• Updated the return value of a FastQValidation on an empty file to return false.

fastQFile_0.0.1.tgz