A survey of key algorithms for statistical computing and its applications in Biostatistics. The course will cover fundamental computational techniques for dynamic programming, sorting, and searching, as well statistical methods for random number generation, numerical integration, function optimization, Markov-Chain Monte Carlo, and the E-M algorithm. Enables students to understand numerical results produced by a computer and to implement their own statistical methods.
Statistical Models and Numerical Methods in Human Genetics
Winter
term(s)
3 Credit Hour(s)
Instructor(s):
Abecasis, Goncalo
Prerequisites: Biostat 602 or Perm. Instr.
Introduction to current statistical methods used in human genetics. Topics will include sampling designs in human genetics, gene frequency estimation, the coalescent method for simulation of DNA sequences, linkage analysis, tests of association, detection of errors in genetic data, and the multi-factorial model. The course will include a simple overview of genetic data and terminology and will proceed with a review of numerical techniques frequently employed in human genetics.
Prerequisites: Biostat 601, Biostat 602 and Biostat 625 or equiv and proficiency in Fortran or C
Modern numerical analysis for statisticians. Combination of theory and practical computational examples illustrating the current trends in numerical analysis relevant to probability and statistics. Topics choose from numerical linear algebra, optimization theory, quadrature methods, splines, and Markov chains. Emphasis on newer techniques such as quasi-random methods of integration, the EM algorithm and its variants, and hidden Markov chains. Applications as time permits to areas such as genetic and medical imaging.
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