Random Effects Analysis within SPM =========================================================================== This document describes how to use SPM to perform second level random effects analyses for fMRI. A summary of RFX issues can be found at http://www.brain.nwu.edu/fmri/spm/ranfx.html. Preparing for the analysis --------------------------------------------------------------------------- To perform a random effects analysis you need to have fit identical (or near identical) models for each subject. You will need a contrast image from each subject that expresses the effect of interest. It may be helpful to copy or link each of the relevant contrasts into a single directory. Specifying and Estimating the Model --------------------------------------------------------------------------- Click the "Basic Models" button and select "One Sample t-test". Select all the contrast images you want to analyze (one per subject!) Select "", as the contrast images don't need any scaling. Answer "No", do not "explicitly mask images", as the contrast images are already NaN-masked. And finally, you can "omit" the global calculation since it's not needed for grand mean scaling. Click Estimate "Now", and you'll all done! Just click "Results" to the results. @(#)RFX.txt 1.1 01/08/30